Aloha JayK,
Chunyi would probably say, "Okay, see if that makes a difference for you." Most of the time I find it more beneficial when I put that area in the light , and if a specific color shows up at a certian location (which may or may not match up to the traditional color "assigned" to that area), I thank my Master's energy and continue with the meditation.
We're not stopping at those locations because they are chakras - there is so much more going on in those areas]/i]. Chunyi has talked about the different perspectives on the body's energy centers and channels, noting that they are just that - perspectives. They're all happening at some level and can be helpful when working with healing the body.
He recomends spending time with a system to get to a core understanding before branching off or integrating other perspectives.
Much Love & have a wonder-full weekend,
Shawn